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In this article, I explain how the Naive Bayes works and I implement a multi-class text classification problem step-by-step in Python. Serafeim Loukas, PhD October 12, 202010 min read
Figure created by the author.
Learn this step by step with the interactive Computer Science and Machine Learning roadmaps.
Naive Bayes classifiers are a collection of classification algorithms based on Bayes' Theorem. It is not a single algorithm but a family of algorithms where all of them share a common principle, i.e. every pair of features being classified is independent of each other. Naive Bayes classifiers have been heavily used for text classification and text analysis machine learning problems. Text Analysis is a major application field for machine learning algorithms. However the raw data, a sequence of symbols (i.e. strings) cannot be fed directly to the algorithms themselves as most of them expect numerical feature vectors with a fixed size rather than the raw text documents with variable length. In this article I explain a) how Naive Bayes works**,** b) how we can use text data and fit them into a model after transforming them into a more appropriate form. Finally, I implement a multi-class text classification problem step-by-step in Python. Let's get started !!!
Naive Bayes classifiers are a collection of classification algorithms based on Bayes' Theorem. It is not a single algorithm but a family of algorithms where all of them share a common principle, i.e. every pair of features being classified is independent of each other. The dataset is divided into two parts, namely, feature matrix and the response/target vector.
Naive Bayes assumes that each feature/variable of the same class makes an:
contribution to the outcome. Side Note: The assumptions made by Naive Bayes are not generally correct in real-world situations. In-fact, the independence assumption is often not met and this is why it is called "Naive " i.e. because it assumes something that might not be true.
Bayes' Theorem finds the probability of an event occurring given the probability of another event that has already occurred. Bayes' theorem is stated mathematically as follows:
Figure created by the author.
where:
Figure created by the author.
Given a data matrix X and a target vector y, we state our problem as:
Figure created by the author.
where, y is class variable and X is a dependent feature vector with dimension d i.e. X = (x1,x2,x2, xd), where d is the number of variables/features of the sample.
Now the "naïve" conditional independence assumptions come into play: assume that all features in X are mutually independent, conditional on the category y :
Figure created by the author.
Finally, to find the probability of a given sample for all possible values of the class variable y , we just need to find the output with maximum probability:
Figure created by the author.
One question that arises at this point is the following:
How are we going to use the raw text data to train the model ? The raw data is a collection of strings ! Text Analysis is a major application field for machine learning algorithms. However the raw data, a sequence of symbols (i.e. strings) cannot be fed directly to the algorithms themselves as most of them expect numerical feature vectors with a fixed size rather than the raw text documents with variable length. In order to address this, scikit-learn provides utilities for the most common ways to extract numerical features from text content, namely:
In this scheme, features and samples are defined as follows:
text
from sklearn.feature_extraction.text import CountVectorizer
corpus = [
'This is the first document.',
'This document is the second document.',
'And this is the third one.',
'Is this the first document?',
]
text
vectorizer = CountVectorizer()
X = vectorizer.fit_transform(corpus)
text
print(vectorizer.get_feature_names())
['and', 'document', 'first', 'is', 'one', 'second', 'the', 'third', 'this']
text
print(X.toarray())
[[0 1 1 1 0 0 1 0 1]
[0 2 0 1 0 1 1 0 1]
[1 0 0 1 1 0 1 1 1]
[0 1 1 1 0 0 1 0 1]]
In the above toy example, we have a collection of strings stored into the variable corpus. Using the text transformer , we can see that we have a specific number of unique strings (vocabulary) in our data. This can be seen by printing the vectorizer.get_feature_names() variable**.** We observe that we have 9 unique words. Next, we printed the transformed data (X) and we observe the following :
E.g. The first transformed row is [0 1 1 1 0 0 1 0 1] and **** th** e unique vocabularyi s ['and', 'document', 'first', 'is', 'one', 'second', 'the', 'third', 'this'],** thus this means that the words "document", "first", "is", "the" and "this" appeared 1 time each in the initial text string (i.e. 'This is the first document.'). Side note: This is the counting approach. The term-frequency transform is nothing more than a transformation of a count matrix into a normalized term-frequency matrix. Hope everything is clear now. If not, read this paragraph as many times as it is needed in order to really grasp the idea and understand this transformation. It is a fundamental step.
Now that you understood how the Naive Bayes and the Text Transformation work, it's time to start coding !
As a working example, we will use some text data and we will build a Naive Bayes model to predict the categories of the texts. This is a multi-class (20 classes) text classification problem. Let's start (I will walk you through). First, we will load all the necessary libraries : text
import numpy as np, pandas as pd
import seaborn as sns
import matplotlib.pyplot as plt
from sklearn.datasets import fetch_20newsgroups
from sklearn.feature_extraction.text import TfidfVectorizer
from sklearn.naive_bayes import MultinomialNB
from sklearn.pipeline import make_pipeline
from sklearn.metrics import confusion_matrix, accuracy_score
text
sns.set() # use seaborn plotting style
Next, let's load the data (training and test sets): text
# Load the dataset
data = fetch_20newsgroups()
text
# Get the text categories
text_categories = data.target_names
text
# define the training set
train_data = fetch_20newsgroups(subset="train", categories=text_categories)
text
# define the test set
test_data = fetch_20newsgroups(subset="test", categories=text_categories)
Let's find out how many classes and samples we have: text
print("We have {} unique classes".format(len(text_categories)))
print("We have {} training samples".format(len(train_data.data)))
print("We have {} test samples".format(len(test_data.data)))
The above prints: text
We have 20 unique classes
We have 11314 training samples
We have 7532 test samples
So, this is a 20-class text classification problem with n_train = 11314 training samples (text sentences) and n_test = 7532 test samples (text sentences). Let's visualize the 5th training sample: text
# let's have a look as some training data
print(test_data.data[5])
As mentioned previously, our data are texts (more specifically, emails) so you should see something like the following printed out:
Figure created by the author.
The next step consists of building the Naive Bayes classifier and finally training the model. In our example, we will convert the collection of text documents (train and test sets) into a matrix of token counts (I explained how this works in Section 3).
To implement that text transformation we will use the make_pipeline function. This will internally transform the text data and then the model will be fitted using the transformed data. text
# Build the model
model = make_pipeline(TfidfVectorizer(), MultinomialNB())
text
# Train the model using the training data
model.fit(train_data.data, train_data.target)
text
# Predict the categories of the test data
predicted_categories = model.predict(test_data.data)
The last line of code predicts the labels of the test set. Let's see the predicted categories names: text
print(np.array(test_data.target_names)[predicted_categories])
array(['rec.autos', 'sci.crypt', 'alt.atheism', ..., 'rec.sport.baseball', 'comp.sys.ibm.pc.hardware', 'soc.religion.christian'], dtype='<U24')
Finally, let's build the multi-class confusion matrix to see if the model is good or if the model predicts correctly only specific text categories. text
# plot the confusion matrix
mat = confusion_matrix(test_data.target, predicted_categories)
sns.heatmap(mat.T, square = True, annot=True, fmt = "d", xticklabels=train_data.target_names,yticklabels=train_data.target_names)
plt.xlabel("true labels")
plt.ylabel("predicted label")
plt.show()
text
print("The accuracy is {}".format(accuracy_score(test_data.target, predicted_categories)))
text
The accuracy is 0.7738980350504514
Figure created by the author.
Note: If you're passionate about diving deeper into machine learning with Python and sklearn, I highly recommend checking out this book; it's a game-changer in breaking down complex topics into digestible insights.
Let's have some fun using the trained model. Let's classify whatever sentence we like 😄 . text
# custom function to have fun
def my_predictions(my_sentence, model):
all_categories_names = np.array(data.target_names)
prediction = model.predict([my_sentence])
return all_categories_names[prediction]
text
my_sentence = "jesus"
print(my_predictions(my_sentence, model))
['soc.religion.christian']
text
my_sentence = "Are you an atheist?"
print(my_predictions(my_sentence, model))
['alt.atheism']
We inserted the string "jesus" to the model and it predicted the class "['soc.religion.christian']". Change the "my_sentence" into other stings and play with the model 😃 .
We saw that Naive Bayes is a very powerful algorithm for multi-class text classification problems. Side Note : If you want to know more about the confusion matrix (and the ROC curve) read this:
ROC Curve Explained using a COVID-19 hypothetical example: Binary & Multi-Class Classification...
From the above confusion matrix , we can verify that the model is really good.
Interesting thing that these 2 categories are really similar and actually one could characterize these as 2 subgroups of a larger group e.g. "religion" in general. Finally, the accuracy on the test set is 0.7739 which is quite good for a 20-class text classification problem 🚀 . That's all folks! Hope you liked this article.
If you liked and found this article useful, follow 👣 me to be able to see all my new posts. Questions? Post them as a comment and I will reply as soon as possible.
Support Vector Machines (SVM) clearly explained: A python tutorial for classification problems... K-Means Clustering: How It Works & Finding The Optimum Number Of Clusters In The Data LSTM Time-Series Forecasting: Predicting Stock Prices Using An LSTM Model Time-Series Forecasting: Predicting Stock Prices Using An ARIMA Model The Best FREE Data Science Resources: FREE Books & Online Courses ROC Curve Explained using a COVID-19 hypothetical example: Binary & Multi-Class Classification... Support Vector Machines (SVM) clearly explained: A python tutorial for classification problems... PCA clearly explained - How, when, why to use it and feature importance: A guide in Python Everything you need to know about Min-Max normalization in Python How Scikit-Learn's StandardScaler works
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